Applied Sciences Department

2024

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

Hunt, M., Hinrichs, A. S., Anderson, D., Karim, L., Dearlove, B. L., Knaggs, J., Constantinides, B., Fowler, P. W., Rodger, G., Street, T., Lumley, S., Webster, H., Sanderson, T., Ruis, C., de Maio, N., Amenga-Etego, L. N., Amuzu, D. S. Y., Avaro, M., Awandare, G. A., Ayivor-Djanie, R., & 76 othersBashton, M., Batty, E. M., Bediako, Y., De Belder, D., Benedetti, E., Bergthaler, A., Boers, S. A., Campos, J., Carr, R. A. A., Cuba, F., Dattero, M. E., Dejnirattisai, W., Dilthey, A., Duedu, K. O., Endler, L., Engelmann, I., Francisco, N. M., Fuchs, J., Gnimpieba, E. Z., Groc, S., Gyamfi, J., Heemskerk, D., Houwaart, T., Hsiao, N-Y., Huska, M., Hölzer, M., Iranzadeh, A., Jarva, H., Jeewandara, C., Jolly, B., Joseph, R., Kant, R., Ki, K. K. K., Kurkela, S., Lappalainen, M., Lataretu, M., Liu, C., Malavige, G. N., Mashe, T., Mongkolsapaya, J., Montes, B., Mora, J. A. M., Morang’a, C. M., Mvula, B., Nagarajan, N., Nelson, A., Ngoi, J. M., da Paixão, J. P., Panning, M., Poklepovich, T., Quashie, P. K., Ranasinghe, D., Russo, M., San, J. E., Sanderson, N. D., Scaria, V., Screaton, G., Sironen, T., Sisay, A., Smith, D., Smura, T., Supasa, P., Suphavilai, C., Swann, J., Tegally, H., Tegomoh, B., Vapalahti, O., Walker, A., Wilkinson, R. J., Williamson, C., de Oliveira, T., Peto, T. E. A., Crook, D., Corbett-Detig, R., Iqbal, Z. & IMSSC2 Laboratory Network Consortium, 30 Apr 2024, (Submitted) bioRxiv, p. 1-35, 35 p.

Research output: Working paper › Preprint

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Evaluating the efficacy of vatiquinone in preclinical models of mitochondrial disease

Kayser, E-B., Chen, Y., Mulholland, M., Truong, V., James, K., Hanaford, A. & Johnson, S., 1 Apr 2024, (Submitted) Research Square, 20 p.

Research output: Working paper › Preprint

2022

Use of carbon additions to enhance zinc removal from mine drainage in short residence time, flow-through sulfate-reducing bioreactors

Gandy, C., Gray, N. D., Mejeha, O., Sherry, A. & Jarvis, A., 20 Sept 2022, (Submitted) 19 p. (SSRN Electronic Journal).

Research output: Working paper › Preprint

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2021

Extremely thermophilic endospores germinate and metabolise organic carbon in sediments heated to above 80°C

Bell, E., Rattray, J. E., Sloan, K., Sherry, A., Pilloni, G. & Hubert, C. R. J., 10 Oct 2021.

Research output: Working paper › Preprint

Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission

The COVID-19 Genomics UK (COG-UK) Consortium, Aggarwal, D., Warne, B., Jahun, A., Hamilton, W., Fieldman, T., Plessis, L., Hill, V., Blane, B., Watkins, E., Wright, E., Hall, G., Ludden, C., Myers, R., Hosmillo, M., Goodfellow, Y., Pinckert, M., Georgana, I., Izuagbe, R., Leek, D., & 25 othersNsonwu, O., Hughes, G., Packer, S., Page, A., Metaxaki, M., Fuller, S., Weale, G., Holgate, J., Howes, R., McFarlane, D., Dougan, G., Pybus, O., Angelis, D. D., Maxwell, P., Peacock, S., Weekes, M., Illingworth, C., Harrison, E., Matheson, N., Goodfellow, I. G., Bashton, M., Smith, D., Nelson, A., Young, G. & McCann, C., 19 May 2021, (Submitted) 25 p.

Research output: Working paper › Preprint

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Model design for non-parametric phylodynamic inference and applications to pathogen surveillance

The COVID-19 Genomics UK (COG-UK) Consortium, Didelot, X., Geidelberg, L., Volz, E. M., Bashton, M., Smith, D., Nelson, A. & Young, G. R., 16 Aug 2021, Cold Spring Harbor Laboratory Press, (bioRxiv).

Research output: Working paper › Preprint

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2020

Drug repurposing prediction for COVID-19 using probabilistic networks and crowdsourced curation

Skelton, D. J., Alsobhe, A., Anastasi, E., Atallah, C., Bird, J. E., Brown, B., Didon, D., Gater, P., James, K., Jr, D. D. L., McLaughlin, J., Moreland, P. E. J., Pocock, M., Whitaker, C. J. & Wipat, A., 22 May 2020, (Submitted) 30 p.

Research output: Working paper › Preprint

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Applied Sciences Department

Research output

Search results

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

Evaluating the efficacy of vatiquinone in preclinical models of mitochondrial disease

Use of carbon additions to enhance zinc removal from mine drainage in short residence time, flow-through sulfate-reducing bioreactors

Extremely thermophilic endospores germinate and metabolise organic carbon in sediments heated to above 80°C

Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission

Model design for non-parametric phylodynamic inference and applications to pathogen surveillance

Drug repurposing prediction for COVID-19 using probabilistic networks and crowdsourced curation