Search results

• 2022

  Evolution of viral variants in remdesivir‐treated and untreated SARS‐CoV‐2‐infected pediatrics patients

  Boshier, F. A. T., Pang, J., Penner, J., Parker, M., Alders, N., Bamford, A., Grandjean, L., Grunewald, S., Hatcher, J., Best, T., Dalton, C., Bynoe, P. D., Frauenfelder, C., Köeglmeier, J., Myerson, P., Roy, S., Williams, R., Silva, T. I., Goldstein, R. A., Breuer, J. & 8 others, The COVID-19 Genomics UK (COG-UK) Consortium, Allan, J., Bashton, M., Loh, J., Nelson, A., Smith, D. L., Yew, W. C. & Young, G. R., 1 Jan 2022, In: Journal of Medical Virology. 94, 1, p. 161-172 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • GS-5734 100%
  • SARS Virus 51%
  • Pediatrics 30%
  • Viral Load 22%
  • Lung 18%
  3 Citations (Scopus)

  3 Downloads (Pure)
• 2021

  Detecting SARS-CoV-2 variants with SNP genotyping

  Harper, H., Burridge, A., Winfield, M., Finn, A., Davidson, A., Matthews, D., Hutchings, S., Vipond, B., Jain, N., The COVID-19 Genomics UK (COG-UK) Consortium, Allan, J., Bashton, M., Loh, J., Nelson, A., Smith, D. L., Yew, W. C., Young, G. R., Edwards, K. & Barker, G., 24 Feb 2021, In: PLoS One. 16, 2, p. 1-12 12 p., e0243185.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • SARS Virus 100%
  • Single Nucleotide Polymorphism 56%
  • Genotype 32%
  • Genetic Variation 21%
  • Costs and Cost Analysis 21%
  18 Citations (Scopus)

  1 Downloads (Pure)

• Genomic epidemiology of covid-19 in care homes in the east of England

  Hamilton, W. L., Tonkin-Hill, G., Smith, E. R., Aggarwal, D., Houldcroft, C. J., Warne, B., Meredith, L. W., Hosmillo, M., Jahun, A. S., Curran, M. D., Parmar, S., Caller, L. G., Caddy, S. L., Khokhar, F. A., Yakovleva, A., Hall, G., Feltwell, T., Pinckert, M. L., Georgana, I., Chaudhry, Y. & 25 others, Brown, C. S., Gonçalves, S., Amato, R., Harrison, E. M., Brown, N. M., Beale, M. A., Chapman, M. S., Jackson, D. K., Johnston, I., Alderton, A., Sillitoe, J., Langford, C., Dougan, G., Peacock, S. J., Kwiatowski, D. P., Goodfellow, I. G., Estee Torok, M., The COVID-19 Genomics UK (COG-UK) Consortium, Allan, J., Bashton, M., Loh, J., Nelson, A., Smith, D. L., Yew, W. C. & Young, G. R., 2 Sep 2021, In: eLife. 10, p. 1-31 31 p., e64618.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Home Care Services 100%
  • England 94%
  • Epidemiology 74%
  • SARS Virus 40%
  • Infection Control 13%
  5 Citations (Scopus)

  8 Downloads (Pure)

• Nosocomial or not? A combined epidemiological and genomic investigation to understand hospital-acquired COVID-19 infection on an elderly care ward

  Wenlock, R. D., Tausan, M., Mann, R., Garr, W., Preston, R., Arnold, A., Hoban, J., Webb, L., Quick, C., Beckett, A., Loveson, K., Glaysher, S., Elliott, S., Malone, C., Cogger, B., Easton, L., The COVID-19 Genomics UK (COG-UK) Consortium, Allan, J., Bashton, M., Loh, J. & 7 others, Nelson, A., Smith, D. L., Yew, W. C., Young, G., Robson, S. C., Hassan-ibrahim, M. O. & Sargent, C., 1 Sep 2021, In: Infection Prevention in Practice. 3, 3, 7 p., 100165.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Healthcare 100%
  • Infection Control 98%
  • Contact Tracing 91%
  • Genome 87%
  • Elderly 87%
  1 Citation (Scopus)

  16 Downloads (Pure)

• Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data

  The COVID-19 Genomics UK (COG-UK) Consortium, Parker, M. D., Lindsey, B. B., Leary, S., Gaudieri, S., Chopra, A., Wyles, M., Angyal, A., Green, L. R., Parsons, P., Tucker, R. M., Brown, R., Groves, D., Johnson, K., Carrilero, L., Heffer, J., Partridge, D. G., Evans, C., Raza, M., Keeley, A. J. & 21 others, Smith, N., Filipe, A. D. S., Shepherd, J. G., Davis, C., Bennett, S., Sreenu, V. B., Kohl, A., Aranday-Cortes, E., Tong, L., Nichols, J., Thomson, E. C., Wang, D., Mallal, S., de Silva, T. I., Bashton, M., Young, G., Allan, J., Loh, J., Nelson, A., Smith, D. & Yew, W., 1 Apr 2021, In: Genome Research. 31, 4, p. 645-658 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • SARS Virus 100%
  • RNA 47%
  • Open Reading Frames 13%
  • Datasets 10%
  • Genome 9%
  9 Citations (Scopus)

  190 Downloads (Pure)