TY - JOUR
T1 - Diversity and bioactivity of actinomycetes from Signy Island terrestrial soils, maritime Antarctic
AU - Pan, Shing Yi
AU - Tan, Geok Yuan Annie
AU - Convey, Peter
AU - Pearce, David
AU - Tan, Irene
PY - 2013
Y1 - 2013
N2 - The Antarctic represents a largely untapped source for isolation of new microorganisms with potential to produce bioactive natural products. Actinomycetes are of special interest among such microorganisms as they are known to produce a large number of natural products, many of which have clinical, pharmaceutical or agricultural applications. We isolated, characterized and classified actinomycetes from soil samples collected from different locations on Signy Island, South Orkney Islands, in the maritime Antarctic. A total of 95 putative actinomycete strains were isolated from eight soil samples using eight types of selective isolation media. The strains were dereplicated into 16 groups based on morphology and Amplified Ribosomal DNA Restriction Analysis (ARDRA) patterns. Analysis of 16S rRNA gene sequences of representatives from each group showed that streptomycetes were the dominant actinomycetes isolated from these soils; however, there were also several strains belonging to diverse and rare genera in the class Actinobacteria, including Demetria, Glaciibacter, Kocuria, Marmoricola, Nakamurella and Tsukamurella. In addition, screening for antibacterial activity and non-ribosomal peptide synthetase genes showed that many of the actinomycete strains have the potential to produce antibacterial compounds.
AB - The Antarctic represents a largely untapped source for isolation of new microorganisms with potential to produce bioactive natural products. Actinomycetes are of special interest among such microorganisms as they are known to produce a large number of natural products, many of which have clinical, pharmaceutical or agricultural applications. We isolated, characterized and classified actinomycetes from soil samples collected from different locations on Signy Island, South Orkney Islands, in the maritime Antarctic. A total of 95 putative actinomycete strains were isolated from eight soil samples using eight types of selective isolation media. The strains were dereplicated into 16 groups based on morphology and Amplified Ribosomal DNA Restriction Analysis (ARDRA) patterns. Analysis of 16S rRNA gene sequences of representatives from each group showed that streptomycetes were the dominant actinomycetes isolated from these soils; however, there were also several strains belonging to diverse and rare genera in the class Actinobacteria, including Demetria, Glaciibacter, Kocuria, Marmoricola, Nakamurella and Tsukamurella. In addition, screening for antibacterial activity and non-ribosomal peptide synthetase genes showed that many of the actinomycete strains have the potential to produce antibacterial compounds.
KW - actinomycete diversity
KW - rare actinomycetes
KW - non-ribosomal peptide synthetase genes
U2 - 10.3724/SP.J.1085.2013.00208
DO - 10.3724/SP.J.1085.2013.00208
M3 - Article
SN - 1004-4078
SN - 1007-7065
SN - 1674-9928
VL - 24
SP - 208
EP - 212
JO - Advances in Polar Science
JF - Advances in Polar Science
IS - 4
ER -