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Expanding interactome analyses beyond model eukaryotes

Katherine James*, Anil Wipat, Simon J. Cockell

*Corresponding author for this work

    Research output: Contribution to journalReview articlepeer-review

    5 Citations (Scopus)

    Abstract

    Interactome analyses have traditionally been applied to yeast, human and other model organisms due to the availability of protein–protein interaction data for these species. Recently, these techniques have been applied to more diverse species using computational interaction prediction from genome sequence and other data types. This review describes the various types of computational interactome networks that can be created and how they have been used in diverse eukaryotic species, highlighting some of the key interactome studies in non-model organisms.
    Original languageEnglish
    Article numberelac007
    Pages (from-to)243–269
    Number of pages27
    JournalBriefings in Functional Genomics
    Volume21
    Issue number4
    Early online date1 May 2022
    DOIs
    Publication statusPublished - 1 Jul 2022

    Keywords

    • systems biology
    • integrative bioinformatics
    • interactomics
    • eukaryotes
    • non-models
    • network biology

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