Genomics-informed outbreak investigations of SARS-CoV-2 using civet

Áine O’Toole*, Verity Hill, Ben Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, J. T. McCrone, Kate Duggan, Martin P. McHugh, Samuel M. Nicholls, Radoslaw Poplawski, The COVID-19 Genomics UK (COG-UK) Consortium, COVID-19 Impact Project (Trinidad & Tobago Group), David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V. F. CarringtonKate Templeton, Andrew Rambaut, Darren L Smith, Matthew Bashton, Gregory R. Young, Clare M McCann, Andrew Nelson, Matthew R Crown, John H Henderson, Amy Hollis, William Stanley, Wen C Yew

*Corresponding author for this work

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Biochemistry, Genetics and Molecular Biology

Immunology and Microbiology