Salinispora pacifica sp. nov., an actinomycete from marine sediments

Lina Ahmed; Paul Jensen; Kelle Freel; Roselyn Brown; Amanda Jones; Byung-Yong Kim; Michael Goodfellow

doi:10.1007/s10482-013-9886-4

Salinispora pacifica sp. nov., an actinomycete from marine sediments

Lina Ahmed, Paul Jensen, Kelle Freel, Roselyn Brown, Amanda Jones, Byung-Yong Kim, Michael Goodfellow

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Abstract

A polyphasic analysis was carried out to clarify the taxonomic status of four marine actinomycete strains that share a phylogenetic relationship and phenotypic characteristics with the genus Salinispora. These strains formed a distinct lineage within the Salinispora 16S rRNA and gyrB trees and were found to possess a range of phenotypic properties and DNA:DNA hybridization values that distinguished them from the type strains of the two validly named species in this genus, Salinispora tropica (CNB-440T, ATCC BAA-916T) and Salinispora arenicola (CNH-643T, ATCC BAA-917T). The combined genotypic and phenotypic data support this conclusion. It is proposed that the strains be designated as Salinispora pacifica sp. nov., the type strain of which is CNR-114T (DSMZ YYYYT = KACC 17160T).

Original language	English
Pages (from-to)	1069-1078
Journal	Antonie van Leeuwenhoek
Volume	103
Issue number	5
DOIs	https://doi.org/10.1007/s10482-013-9886-4
Publication status	Published - May 2013

Keywords

Salinispora pacifica sp. nov.
polyphasic taxonomy
obligate marine actinomycete
marine sediments
Fiji

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10.1007/s10482-013-9886-4

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title = "Salinispora pacifica sp. nov., an actinomycete from marine sediments",

abstract = "A polyphasic analysis was carried out to clarify the taxonomic status of four marine actinomycete strains that share a phylogenetic relationship and phenotypic characteristics with the genus Salinispora. These strains formed a distinct lineage within the Salinispora 16S rRNA and gyrB trees and were found to possess a range of phenotypic properties and DNA:DNA hybridization values that distinguished them from the type strains of the two validly named species in this genus, Salinispora tropica (CNB-440T, ATCC BAA-916T) and Salinispora arenicola (CNH-643T, ATCC BAA-917T). The combined genotypic and phenotypic data support this conclusion. It is proposed that the strains be designated as Salinispora pacifica sp. nov., the type strain of which is CNR-114T (DSMZ YYYYT = KACC 17160T).",

keywords = "Salinispora pacifica sp. nov., polyphasic taxonomy, obligate marine actinomycete, marine sediments, Fiji",

author = "Lina Ahmed and Paul Jensen and Kelle Freel and Roselyn Brown and Amanda Jones and Byung-Yong Kim and Michael Goodfellow",

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AU - Ahmed, Lina

AU - Jensen, Paul

AU - Freel, Kelle

AU - Brown, Roselyn

AU - Jones, Amanda

AU - Kim, Byung-Yong

AU - Goodfellow, Michael

PY - 2013/5

Y1 - 2013/5

N2 - A polyphasic analysis was carried out to clarify the taxonomic status of four marine actinomycete strains that share a phylogenetic relationship and phenotypic characteristics with the genus Salinispora. These strains formed a distinct lineage within the Salinispora 16S rRNA and gyrB trees and were found to possess a range of phenotypic properties and DNA:DNA hybridization values that distinguished them from the type strains of the two validly named species in this genus, Salinispora tropica (CNB-440T, ATCC BAA-916T) and Salinispora arenicola (CNH-643T, ATCC BAA-917T). The combined genotypic and phenotypic data support this conclusion. It is proposed that the strains be designated as Salinispora pacifica sp. nov., the type strain of which is CNR-114T (DSMZ YYYYT = KACC 17160T).

AB - A polyphasic analysis was carried out to clarify the taxonomic status of four marine actinomycete strains that share a phylogenetic relationship and phenotypic characteristics with the genus Salinispora. These strains formed a distinct lineage within the Salinispora 16S rRNA and gyrB trees and were found to possess a range of phenotypic properties and DNA:DNA hybridization values that distinguished them from the type strains of the two validly named species in this genus, Salinispora tropica (CNB-440T, ATCC BAA-916T) and Salinispora arenicola (CNH-643T, ATCC BAA-917T). The combined genotypic and phenotypic data support this conclusion. It is proposed that the strains be designated as Salinispora pacifica sp. nov., the type strain of which is CNR-114T (DSMZ YYYYT = KACC 17160T).

KW - Salinispora pacifica sp. nov.

KW - polyphasic taxonomy

KW - obligate marine actinomycete

KW - marine sediments

KW - Fiji

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DO - 10.1007/s10482-013-9886-4

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JO - Antonie van Leeuwenhoek

JF - Antonie van Leeuwenhoek

IS - 5

ER -

Salinispora pacifica sp. nov., an actinomycete from marine sediments

Abstract

Keywords

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