Searching optimal sigma parameter in Radial Basis Kernel Support Vector Machine for classification of HIV sub-type viruses

Zeyneb Kurt*, Oguzhan Yavuz

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

We propose intelligent methods to classify two different HIV virus types, i.e., R5X4 and R5 or X4 with low computational complexity. Since R5X5 virus has same the features of R5 and X4 viruses, diagnosis of R5X4 can not be determined easily. In this study, the statistical data of R5X4, R5 and X4 was obtained by accessible residues and modelled by Auto-regressive (AR) model. After that the pre-processed data was used for determining the optimal σ value in Radial Basis Kernel of Support Vector Machine (SVM).

Original languageEnglish
Title of host publicationSIGMAP 2010 - Proceedings of the International Conference on Signal Processing and Multimedia Applications
Pages163-166
Number of pages4
Publication statusPublished - 2010
EventInternational Conference on Signal Processing and Multimedia Applications, SIGMAP 2010 - Athens, Greece
Duration: 26 Jul 201028 Jul 2010

Publication series

NameSIGMAP 2010 - Proceedings of the International Conference on Signal Processing and Multimedia Applications

Conference

ConferenceInternational Conference on Signal Processing and Multimedia Applications, SIGMAP 2010
Country/TerritoryGreece
CityAthens
Period26/07/1028/07/10

Keywords

  • Auto-regressive Model
  • HTV
  • ROC analysis
  • Support Vector Machine

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